2020 | Rousseau-Gueutin, M., Belser, C., Da Silva, C., Richard, G., Istace, B., Cruaud, C., Falentin, C., Boideau, F., Boutte, J., Delourme, R., Deniot, G., Engelen, S., Ferreira de Carvalho, J., Lemainque, A., Maillet, L., Morice, J., Wincker, P., Denoeud, F., Chèvre, A.M., Aury, J.M. Long-read assembly of the Brassica napus reference genome Darmor-bzh. Gigascience 9(12):giaa137. |
| Giraud, D., Lima, O., Huteau, V., Coriton, O., Boutte, J., Kovarik, A., Leitch, A.R., Leitch, I.J., Aïnouche, M., Salmon, A. Evolutionary dynamics of transposable elements and satellite DNAs in polyploid Spartina species. Plant Sci. 302:110671. |
| Azibi, T., Hadj-Arab, H., Lodé, M., Ferreira de Carvalho, J., Trotoux, G., Negre, S., Gilet, M.M., Boutte, J., Lucas, J., Vekemans, X., Chevre, A.M., Rousseau-Gueutin, M. Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self- incompatibility signalling pathway. Plant Reprod. 33(1):43-58. |
| Boutte, J., Maillet, L., Chaussepied, T., Letort, S., Aury, J.M., Belser, C., Boideau, F., Brunet, A., Coriton, O., Deniot, G., Falentin, C., Huteau, V., Lodé, M., Morice, J., Trotoux, G., Chèvre, A.M., Rousseau-Gueutin, M., Ferreira de Carvalho, J., Genome size variation and comparative genomics reveal intraspecific diversity in Brassica rapa. Front. Plant Sci. 11:577536. |
| Straub, S.C.K., Boutte, J., Fishbein, M., Livshultz, T. Enabling evolutionary studies at multiple scales in Apocynaceae through Hyb-Seq. Appl. Plant. Sci. 8(11):e11400. |
2019 | Boutte, J., Fishbein, M., Liston, A., Straub, S.C.K. NGS-Indel Coder: A new pipeline to code indel characters in phylogenomic data with an example of its application in milkweeds (Asclepias). Mol. Phylogenet. Evol. 139. |
2018 | Fishbein, M., Livshultz, T., Straub, S.C.K., Simões A.O., Boutte, J., McDonnell, A., Foote, A. Evolution on the backbone: Apocynaceae phylogenomics and new perspectives on growth forms, flowers and fruits. Am. J. Bot. 105(3):495-513. |
| Fishbein, M., Straub, S.C.K., Boutte, J., Hansen, K., Cronn, R.C., Liston, A. Evolution at the tips: Asclepias (Apocynaceae) phylogenomics and new perspectives on leaf surfaces. Am. J. Bot. 105(3):514-524. |